This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001JK35.1

Portugal/LOC_001JK35.1/2024-07
L. Ze-Ze, C. Nunes, M. Sousa, R. de Sousa, C. Gomes, A. S. Santos, R. T. Alexandre, F. Amaro, T. Loza, M. Blanco & M. J. Alves

National Institute of Health Dr. Ricardo Jorge P.I. (INSA), Center for Vectors and Infectious Disease Research (CEVDI)

Sample details

Collection date
2024-07
Earliest release date
2026-09-17
Sampling location
Portugal (Braganca)
Isolate name
PTHuCCHFV79532_INSA2024

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2026-09-17
INSDC accession S segment

Host

Host

Submission details

Submission ID
PQ361746.1.S
Submitting group
Date submitted
2026-09-26 03:32:29 UTC
Date released
2026-09-26 03:35:49 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
4
Length S segment
608 (33.7%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • T165C
  • A311G
  • C327T
  • G330A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:K91R
Deletions
N/A
Insertions
N/A

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