This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001FVMZ.1

Portugal/LOC_001FVMZ.1/2024-07
L. Ze-Ze, C. Nunes, M. Sousa, R. de Sousa, C. Gomes, A. S. Santos, R. T. Alexandre, F. Amaro, T. Loza, M. Blanco & M. J. Alves

National Institute of Health Dr. Ricardo Jorge P.I. (INSA), Center for Vectors and Infectious Disease Research (CEVDI)

Sample details

Collection date
2024-07
Earliest release date
2026-09-17
Sampling location
Portugal (Braganca)
Isolate name
PTHuCCHFV79532_INSA2024

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2026-09-17
INSDC accession S

Host

Host

Submission details

Submission ID
PQ361746.1.S
Submitting group
Date submitted
2026-09-26 03:02:56 UTC
Date released
2026-09-26 03:05:54 UTC

Lineage

Segment S Lineage
III

Files

Annotations

Alignment and QC

Total SNPs S
44
Length S
608 (36.4%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • C178A
  • T181C
  • G189A
  • T199C
  • G202A
  • G229A
  • C235T
  • A247G
  • G271A
  • C295T
  • A298G
  • A322G
  • A327G
  • C343T
  • G346A
  • A355G
  • A358C
  • C370T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:R45K
  • NP:K91R
  • NP:T124A
  • NP:G125N
  • NP:L179Q
  • NP:H195R
Deletions
N/A
Insertions
N/A

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